2.1 (2020-01-06)

• Proper error handling. Instead of calling error, now either a warning is logged or a proper exception is thrown.

• Faster fastq parser, faster fusion of read pairs.

• Cleanup of messy code. Ghc >= 7.10 is now required.

2.0 (2019-05-28)

• Switched from "iteratee" to "streaming". The code looks much cleaner and is easier to understand.

• Repaired mistreatment of bam headers when merging files.

1.1.0 (2018-10-15)

• Fix for previous workaround. Repairs writeBamFile.

1.1.0 (2018-10-12)

• Work around changes in exceptions-0.10.0. This version should compile cleanly and work with ghc-8.6.1.

1.0.4 (2018-09-02)

• bugfix: memory leak in BGZF encoder

1.0.3 (2018-08-26)

• bugfix: seeking had been broken for a while

1.0.2 (2018-07-08)

• compatibility with ghc-8.4.1
• bugfix: long headers were garbled when writing BAM files
• more robust imports to avoid breakage when dependencies update

1.0.1 (2018-02-06)

• Bugfix: merging of overlapping read pairs

1.0.0 (2018-01-28)

• Removed dead code and failed experiments. biohazard is now feature complete by decree.