sequence-formats: A package with basic parsing utilities for several Bioinformatic data formats.
Contains utilities to parse and write Eigenstrat, Fasta, FreqSum, VCF, Plink and other file formats used in population genetics analyses.
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| Versions [RSS] | 1.1.4.1, 1.3.1, 1.3.2, 1.3.2.1, 1.3.3, 1.4.0, 1.4.0.1, 1.4.1, 1.5.0, 1.5.1, 1.5.1.1, 1.5.1.2, 1.5.1.3, 1.5.1.4, 1.5.2, 1.6.0, 1.6.1, 1.6.3, 1.6.6.0, 1.6.6.1, 1.6.7.0, 1.7.0, 1.7.1, 1.8.0.0, 1.8.0.1, 1.8.1.0, 1.8.1.1, 1.9.0.0, 1.10.0.0 |
|---|---|
| Change log | Changelog.md |
| Dependencies | attoparsec (>=0.14.4), base (>=4.7 && <5), bytestring (>=0.11.5.2), containers (>=0.6.7), errors (>=2.3.0), exceptions (>=0.10.5), foldl (>=1.4.15), lens-family (>=2.1.2), pipes (>=4.3.16), pipes-attoparsec (>=0.6.0), pipes-bytestring (>=2.1.7), pipes-safe (>=2.3.4), pipes-zlib (>=0.4.4.2), transformers (>=0.5.6.2), vector (>=0.13.1.0) [details] |
| License | GPL-3.0-only |
| Author | Stephan Schiffels |
| Maintainer | stephan.schiffels@mac.com |
| Category | Bioinformatics |
| Home page | https://github.com/stschiff/sequence-formats |
| Bug tracker | https://github.com/stschiff/sequence-formats/issues |
| Uploaded | by stephan_schiffels at 2024-08-21T10:44:51Z |
| Distributions | LTSHaskell:1.10.0.0, NixOS:1.8.1.1, Stackage:1.10.0.0 |
| Reverse Dependencies | 1 direct, 0 indirect [details] |
| Downloads | 6646 total (50 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
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| Status | Docs available [build log] Last success reported on 2024-08-21 [all 1 reports] |