Contents
Index
bio-0.5.3: A bioinformatics library
A
B
C
D
E
F
G
H
I
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
!
?
All
Index - D
database
Bio.Alignment.BlastData
,
Bio.Alignment.BlastFlat
date
Bio.Sequence.SFF_name
,
Bio.Sequence.SFF
dbchars
Bio.Alignment.BlastData
,
Bio.Alignment.BlastFlat
dbsequences
Bio.Alignment.BlastData
,
Bio.Alignment.BlastFlat
decCh
Bio.Sequence.SFF_name
decode2Bit
Bio.Sequence.TwoBit
,
Bio.Sequence
decode36
Bio.Sequence.SFF_name
decodeDate
Bio.Sequence.SFF_name
decodeKO
Bio.Sequence.KEGG
decodeLocation
Bio.Sequence.SFF_name
decodeReadName
Bio.Sequence.SFF_name
,
Bio.Sequence.SFF
decodeUP
Bio.Sequence.KEGG
decomment
Bio.Sequence.GeneOntology
, Bio.Sequence.GOA
defragSeq
Bio.Sequence.SeqData
,
Bio.Sequence
Del
Bio.Alignment.AlignData
delete
1 (Function)
Bio.Location.LocMap
2 (Function)
Bio.GFF3.FeatureHier
deleteBy
Bio.Location.LocMap
Dir
1 (Type/Class)
Bio.Alignment.AlignData
2 (Type/Class)
Bio.Alignment.BED
DiscardFilter
Bio.Sequence.SFF_filters
discard_dots
Bio.Sequence.SFF_filters
discard_empty
Bio.Sequence.SFF_filters
discard_key
Bio.Sequence.SFF_filters
discard_length
Bio.Sequence.SFF_filters
discard_mixed
Bio.Sequence.SFF_filters
display
1 (Function)
Bio.Location.Position
2 (Function)
Bio.Location.ContigLocation
3 (Function)
Bio.Location.Location
4 (Function)
Bio.Location.SeqLocation
displayContigSeqLoc
Bio.Location.SeqLocation
displaySeqPos
Bio.Location.SeqLocation
divMods
Bio.Sequence.SFF_name
dlength
Bio.Sequence.SFF_filters