BlastHTTP: Libary to interface with the NCBI blast REST interface
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Warnings:
- 'ghc-options: -O2' is rarely needed. Check that it is giving a real benefit and not just imposing longer compile times on your users.
Searches for a provided nucleotide or protein sequence with the NCBI Blast REST service and returns a blast result in xml format as BlastResult datatype.
For more information on BLAST refer to: http://blast.ncbi.nlm.nih.gov/Blast.cgi.
Information on the webservice can be found at: http://www.ncbi.nlm.nih.gov/BLAST/developer.shtml.
If you plan to submit more than 20 searches in one session, please look up the Usage Guidelines in the webservice information.
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Properties
Versions | 0.0.1, 1.0.0, 1.0.1, 1.2.0, 1.2.1, 1.3.0, 1.4.0, 1.4.0, 1.4.1, 1.4.2 |
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Change log | changelog |
Dependencies | base (>=4.5 && <5), BiobaseBlast (>=0.3.0 && <0.3.1), BiobaseFasta (>=0.3.0 && <0.3.1), bytestring, conduit, either-unwrap, HTTP, http-conduit, hxt, mtl, network (==2.8.0.0), transformers, zip-archive [details] |
License | GPL-3.0-only |
Copyright | Florian Eggenhofer |
Author | Florian Eggenhofer, Christian Hoener zu Siederdissen |
Maintainer | egg@informatik.uni-freiburg.de |
Category | Bioinformatics |
Home page | https://github.com/eggzilla/BlastHTTP |
Source repo | head: git clone https://github.com/eggzilla/BlastHTTP this: git clone https://github.com/eggzilla/BlastHTTP/tree/1.4.0(tag 1.4.0) |
Uploaded | by FlorianEggenhofer at 2019-06-18T11:05:20Z |
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- Biobase
- BLAST
Downloads
- BlastHTTP-1.4.0.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
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