Bio.RNAcodeData

This module contains a hierarchical data structure for RNAcode output For more information on RNAcode consult: http://wash.github.io/rnacode/

Documentation

data RNAcode

All elements of RNAcode output are contained in this datatype

Constructors

RNAcode

Fields

rnacodeHits :: [RNAcodeHit]

rcAlignmentNumber :: Maybe Int

rcTime :: Maybe Double

rcSampleNumber :: Maybe Int

rcDelta :: Maybe Double

rcBigOmega :: Maybe Double

rcSmallOmega :: Maybe Double

rcStopPenalty :: Maybe Double

Instances

Eq RNAcode

Show RNAcode

data RNAcodeHit

RNAcode Hit

Constructors

RNAcodeHit

Fields

hss :: Int

frame :: Double

length :: Int

from :: Int

to :: Int

name :: String

start :: Int

end :: Int

score :: Double

pvalue :: Double

Instances

Eq RNAcodeHit

Show RNAcodeHit