collapse-duplication: Collapse the duplication output into clones and return their frequencies.
Process the output of heatitup in order to collapse sequences into clones by similar ITD mutations.
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- collapse-duplication-0.4.0.1.tar.gz [browse] (Cabal source package)
- Package description (as included in the package)
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| Versions [RSS] | 0.4.0.1 |
|---|---|
| Dependencies | base (>=4.7 && <5), bytestring, bytestring-show, cassava, collapse-duplication, containers, hierarchical-clustering, lens, optparse-generic, split [details] |
| License | GPL-3.0-only |
| Copyright | Copyright: (c) 2018 Gregory W. Schwartz |
| Author | Gregory W. Schwartz |
| Maintainer | gsch@mail.med.upenn.edu |
| Category | Bioinformatics |
| Home page | http://github.com/GregorySchwartz/collapse-duplication#readme |
| Source repo | head: git clone https://github.com/GregorySchwartz/collapse-duplication |
| Uploaded | by GregorySchwartz at 2018-08-28T19:24:34Z |
| Distributions | |
| Executables | collapse-duplication |
| Downloads | 788 total (7 in the last 30 days) |
| Rating | (no votes yet) [estimated by Bayesian average] |
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| Status | Docs available [build log] Last success reported on 2018-08-28 [all 1 reports] |