SelectSequencesFromMSA: Selects a representative subset of sequences from multiple sequence alignment.

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SelectSequences is a tool for selection of a representative subset of sequences from a multiple sequence alignment in clustal format.

Optional Dependencies:

  • RNAz Installation via cabal-install:

cabal install SelectSequencesFromMSA

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Versions [RSS] 1.0.2, 1.0.3, 1.0.4, 1.0.5
Dependencies base (>=4.5 && <5), biocore, biofasta, bytestring, ClustalParser (>=1.2.3), cmdargs, containers, directory, either-unwrap, filepath, matrix, parsec, process, SelectSequencesFromMSA, text, text-metrics, transformers, vector, ViennaRNAParser (>=1.3.2) [details]
Tested with ghc ==7.10.3, ghc ==8.2.2
License GPL-3.0-only
Author Florian Eggenhofer
Maintainer egg@informatik.uni.freiburg.de
Category Bioinformatics
Source repo head: git clone https://github.com/eggzilla/SelectSequencesFromMSA
this: git clone https://github.com/eggzilla/SelectSequencesFromMSA/tree/1.0.5(tag 1.0.5)
Uploaded by FlorianEggenhofer at 2018-03-12T18:16:38Z
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Executables SelectSequencesFromMSA
Downloads 2829 total (1 in the last 30 days)
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Status Docs available [build log]
Last success reported on 2018-03-12 [all 1 reports]